BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013B11SP1|AL426481
(841 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1663 1655 0.0
>3x_Contig1663
Length = 13533
Score = 1655 bits (835), Expect = 0.0
Identities = 835/835 (100%)
Strand = Plus / Plus
Query: 1 ctatgtagcttatttgtcaccggtccttgaggtataaatcctggctggggtggaactggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1151 ctatgtagcttatttgtcaccggtccttgaggtataaatcctggctggggtggaactggg 1210
Query: 61 gactgatgctgattgtacctaccgccgttgacagggggacgaaattgttgcggctgcata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1211 gactgatgctgattgtacctaccgccgttgacagggggacgaaattgttgcggctgcata 1270
Query: 121 ggcggtggtggtgaagagtaagtctgtggtggtggaactgccgaacttggggcatatcgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1271 ggcggtggtggtgaagagtaagtctgtggtggtggaactgccgaacttggggcatatcgt 1330
Query: 181 tgaggtccatatcccacaccatactgaggattaacagtaccttgtaacataccattaggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1331 tgaggtccatatcccacaccatactgaggattaacagtaccttgtaacataccattaggc 1390
Query: 241 ggtccccgtacaggaaccttgccttgtggcatatgttgatgcataccataggatgtacct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1391 ggtccccgtacaggaaccttgccttgtggcatatgttgatgcataccataggatgtacct 1450
Query: 301 tgaggaatatgtgcatttggtcccgggtgcatggttcccgggtgcatggttctcgcatca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1451 tgaggaatatgtgcatttggtcccgggtgcatggttcccgggtgcatggttctcgcatca 1510
Query: 361 taatctggagacacttgtcttggtgctccatgttgacgagaatataagtttggttgagct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1511 taatctggagacacttgtcttggtgctccatgttgacgagaatataagtttggttgagct 1570
Query: 421 aaatgtcttggtattcttccccgcatctctctatcattcacaccaaggggagtaggtgtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1571 aaatgtcttggtattcttccccgcatctctctatcattcacaccaaggggagtaggtgtt 1630
Query: 481 tcatcaattggtgcactcatatgaggattcatattagagtttgagtggggggaaaaaggg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1631 tcatcaattggtgcactcatatgaggattcatattagagtttgagtggggggaaaaaggg 1690
Query: 541 gcacgagcatttgagaaagaattctgtccctcaacctctagatgaggcaaactttgtggg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1691 gcacgagcatttgagaaagaattctgtccctcaacctctagatgaggcaaactttgtggg 1750
Query: 601 atccttggttcgccttctctacgatattgttcgcgctgagacacagacgaaaaatcgcca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1751 atccttggttcgccttctctacgatattgttcgcgctgagacacagacgaaaaatcgcca 1810
Query: 661 gattcagcaattgtctcataagtagcttgttgtacgtttggtggattgaaaccagctgaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1811 gattcagcaattgtctcataagtagcttgttgtacgtttggtggattgaaaccagctgaa 1870
Query: 721 gaattataagcaggtccgttgtaattagcgttttgatacggatgttggtgatttggctgg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1871 gaattataagcaggtccgttgtaattagcgttttgatacggatgttggtgatttggctgg 1930
Query: 781 ctttgggggtattgtgctttaaagtgggttctaccatgttctgaaggatggcccc 835
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1931 ctttgggggtattgtgctttaaagtgggttctaccatgttctgaaggatggcccc 1985
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4061
Number of Sequences: 1807
Number of extensions: 4061
Number of successful extensions: 31
Number of sequences better than 1.0e-20: 1
length of query: 841
length of database: 10,358,551
effective HSP length: 16
effective length of query: 825
effective length of database: 10,329,639
effective search space: 8521952175
effective search space used: 8521952175
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)